Original Article
 
A novel methodology for quantitative analysis of different phenotypes of locomotion behavior: C. elegans bioinformatics model
Keyur Vora1, Bill Walthall1, Gennady Cymbalyuk2
1Department of Biological Sciences, Georgia State University, Atlanta, GA, USA
2Department of Neurosciences, Georgia State University, Atlanta, GA, USA

Article ID: 100008C06KV2018
doi: 10.5348/100008C06KV2018OA

Corresponding Author:
Keyur Vora
Department of Biological Sciences
Georgia State University
Atlanta, GA, USA

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How to cite this article
Vora K, Walthall B, Cymbalyuk G. A novel methodology for quantitative analysis of different phenotypes of locomotion behavior: C. elegans bioinformatics model. Edorium J Cell Biol 2018;4:100008C06KV2018.


ABSTRACT

Aims: Genetic makeup plays an important role in producing variety of anatomical structures and locomotion patterns accordingly. It is very challenging to define any genetic basis for the generation of a functional motor output during locomotion, formed by the interaction between neural networks. Hence, detecting locomotion pattern under different genetic environments is an important area of biological research. The main focus of this research is development of novel quantitative methods which are suitable for detecting locomotion behavior of wildtype and mutant forms of C. elegans.

Methods: Wildtype and cnd-1 strains were studied using Q-imaging fluorescent microscope for worm localization, image filtering and video capturing data collection. All data were subjected to MATLAB image processing algorithm for quantitative and graphical analysis.

Results: Wildtype animals were used as the standard for comparison as they show symmetric movements, with no favoring of either axis. In contrast cnd-1 shows more activity in markers near head and tail on dorsal side as well as central markers on ventral side. This neuromuscular coordination creates dorsal asymmetry in cnd-1 mutant forms.

Conclusion: The algorithms and codes developed in this study provide a versatile tool to biologists interested in deciphering the fundamental molecular mechanisms of the locomotion behavior among diverse population of worms. The codes developed are likely to assist biologists efficiently in deriving useful quantitative information on the motility behavior of microorganisms.

Keywords: C. elegans, MATLAB bioinformatics, Quantitative locomotion analysis


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Author Contributions
Keyur Vora – Substantial contributions to conception and design, Acquisition of data, Drafting of article, Revising it critically for important intellectual content, Final approval of the version to be published
Bill Walthall – Substantial contributions to conception and design, Acquisition of data, Drafting of article, Final approval of the version to be published
Gennady Cymbalyuk – Substantial contributions to conception and design, Acquisition of data, Drafting of article, Final approval of the version to be published
Guarantor of Submission
The corresponding author is the guarantor of submission.
Source of Support
None
Consent Statement
Written informed consent was obtained from the patient for publication of this study.
Conflict of Interest
No affiliations with or involvement in any organization or entity with any financial interest (such as honoraria; educational grants; participation in speakers’ bureaus; membership, employment, consultancies, stock ownership, or other equity interest; and expert testimony or patent-licensing arrangements), or non-financial interest (such as personal or professional relationships, affiliations, knowledge or beliefs) in the subject matter or materials discussed in this manuscript.
Copyright
© 2018 Keyur Vora et al. This article is distributed under the terms of Creative Commons Attribution License which permits unrestricted use, distribution and reproduction in any medium provided the original author(s) and original publisher are properly credited. Please see the copyright policy on the journal website for more information.